RABINOVITCH PROTOCOL
MANUAL
U:/PUBLIC/Lab Manual/Rabinovitch Manual 2005
Preparing Chemical Waste for Pickup and
Disposal
Problems
with Cooling, Heating, the Building or Scientic Instruments
Chilled Water Failure in Flow Cytometry Room
General Heating, Cooling, Fumehood, or
Building Problems:
SECTION 2
Record Keeping, Animal Use AND
Computer Use
Tissue
Culture Media Preparation
Calculation
of Population doulbing
Esophageal
Squamous Cell Media
Starting
Primary Cultures from Barrett’s Esophagus Biopsies
Set
up of Esophageal Squamous cultures
Soft
Agar Assay for Colony Formation..
Lymphocyte
Preparation from Whole Blood
Preparation
of Mouse Embryo Fibroblast Cell Strains
Fixation
and embedding cultured cells in agarose for paraffin
Section 4 Maintenance and calibration of
Incubators
Testing
CO2 levels in the incubators
Section 5 Flow protocols For Apoptosis and
Proliferative Survival
Hoechst
33342/SYTO 11 Protocol for Apoptosis
Hoechst
33342/SYTO 11/CMXRosamine Protocol for Apoptosis
Hoechst
33342/SYTO 11/PI Protocol for Apoptosis
Hoechst
33342/SYTO 11/PI/CEN Protocol for
Apoptosis
Processing data by the Hoechst 33342/SYTO
11/PI/CEN Protocol for Apoptosis
Hoechst
33342/MTG/CMXRosamine Protocol for Apoptosis
Proliferative
Survival Protocol
Processing data for the Proliferative
Survival Protocol
Section 6 Protocols for FISH and Antibody
Stains
Deparaffinization
of tissues on slides
Assay
for Detection of Cyclin B by Flow Cytometry (small cell number)
Double
Staining with Cyclin B and Pericentrin (sequential staining)
Epi
shake off procedure to isolate G1 cells for FISH and G2 cells for anaphase
bridge scoring
Epi
shake off: isolation of epithelial cells
Tissue
Digestion and CK Staining
Slide
Fixation for CK-sorted cells dropped from Flow Cytometer
Fixation
of Sorted Cells for FISH
Digoxigenin
Labeling of BAC DNA for FISH
Preparation,
dropping, and fixing of lymphocyte metaphase slides
Staining
of Tissue OR CELLS WITH CATALASE (can be used for most antibody stains)
RC
DC Assay Protein Quantification..
OXYBLOT
PROTEIN OXIDATION DETECTION
Section 7 Protocols to evaluate telomere
length
Preparation
of Tissue for Telomere Probe
Light fixation of fresh or frozen tissue
Hybridization
PNA and Amadate Probes
Confocal
Microscope set up for photos
Protocol
For Image Analysis Using Optimas 6.51
EXCEL
MACRO INSTRUCTIONS FOR THE ANALYSIS OF OPTIMAS DATA
TERMINAL
RESTRICTION FRAGMENT (TRF) PROTOCOL
Section 8 BAC cloning protocols
Plasmid
Mini-Prep: Preparation of BAC DNA for
analytical purposes.
Section 9
Flow Protocols for Cell Cycle, Proliferation, Viability and Coast Sea
Food.
Hoescht/Fluorescein
Diacetate (FDA)/Propidium Iodide (PI)
Section 10 Protocols for Arrays and RNA preps
for Arrays
Basic
RNA extraction detailed protocol
RNA
Extraction from Pancreatic Tissue (LiCl/RNeasy combination method)
General
Instructions for Bioanalyzer RNA
Preparation of cDNA from total RNA (Reverse Transcription, RT)
ENZO
RNA prep for generation of cRNA..
AFFYmetrix
RNA prep for generation of cRNA using IVT kit
Section 11
Macros, SAM, GeneTraffic hints
Entropy Macro “SID.xlm” (general purpose)
Entropy Macro “SID.xlm” (Telomere arm
gain_loss, centromere gain_loss)
Transfer
of Data from CEA to GeneTraffic..
Extracting
pixel intensity data from BAC array images
Analysis
of BAC array data using R scripts
Quality
control evaluation of array data
Section 12
Analysis of DNA for Genetic Instability and General DNA protocols
Multiple
Displacement Amplification (MDA) using GenomiPhi kit
DNA
purification using QIAGEN QIAEXII kit
Arbitrarily
Primed PCR (AP-PCR)
Gentra+
Puregene DNA Isolation from Sorted Nuclei
PICOGREEN
PROTOCOL TO QUANTIFY DNA IN FLUOROCOUNTER
Phenol
Chloroform extraction for Buffy Coat Cells or other tissue
1st BLOT WASH (2X SSC, 0.1% SDS)
Calcium Chloride Sheath Fluid (5mM)
Use for sorting
flow cytometry samples onto slides
Hoechst 33342 (viable DNA stain) 1mM
DNA Loading Dye for Acrylamide Gel
10X PBS solution for Flow Cytometer
SECTION 14
Use of Influx and equipment in other laboratories
Influx
Instructions for Operation –
Table 1: Normal ADC and Pre-amp assignments
as of 9/25/03
Running
your samples in the cytometer
For more advanced users (recommended):
PROTOCOL
TO CALIBRATE MULTICHANNEL PIPETTES (Finnpipettes)
Operation
of GAMMACELL 40 Irradiator
Dealing
with the finicky pH meter
Opening and Saving File in Excel
SECTION 15 Protocols No Longer in Use
Assay
for Detection of Phosphorylated Histone H3 by Flow Cytometry
Western
Protocol for WRN Protein
Infection
of Cells with Retrovirus
Arbitrarily
Primed PCR (AP-PCR) old version..
Inter
Simple Sequence Repeat PCR (ISSR)
Acrylamide
(6%) gel solutions for ISSR and AP-PCR
ABI
sequencing (PCR product) Protocol.
Acridine
Orange - Alkaline Unwinding DNA Damage Assay
Check off sheet for Alkaline Unwinding
Protocol
Fluorometric
DNA Unwinding Assay (Macro assay)
Micro
alkaline unwinding with PicoGreen
Pancreas
Parenchyma Dissociation for CK Sort
Two
color Anti-CldUrd and anti IdUrd Ab
Staining
Lymphocyte
Proliferation Tritiated Thymidine
List
all chemicals that come into the lab
Record
of media supplies to other labs.
BioRad
Confocal Photography Record
Properties
of Nucleic Acid Stains Used in Flow Cytometry
Centrifuge
G force calculation
In an
emergency
Call Campus
Heath Service 548-4848
Room NN256A
or
go directly to the
University Hospital Emergency Room
or
call 9-911
http://depts.washington.edu/hhpccweb/CampusHealth.html
http://www.ehs.washington.edu/forms/IncidentFillin.pdf
1.
Every lab member should
attend the yearly Blood Borne Pathogen review class. http://www.ehs.washington.edu/forms/classes/bpecrform.htm
2.
Everyone who works in the
tissue culture room must:
Have taken or be taking the Hepatitis B vaccination (685-1071)
or
Sign a form with the occupational safety
nurse declining the offer (548-6117).
3. No
food or drink is ever allowed in the
tissue culture room.
4. Gloves and lab coats should be worn when working
in the tissue culture room.
5. If you
are working with human tissue, you should also wear goggles.
6. Mouth pipetting is never allowed.
7. The “Biohazard Safety Manual” is located on the
shelf over the bench by Peter’s office and in the K-089 tissue culture
room. Familiarize yourself with its
contents.
8. Contaminated sharps go into the red sharps
biohazard container. This waste must be
autoclaved before disposal.
9. Waste -- All tissue culture flasks must be treated
with bleach for at least 10 minutes before
disposal.
All waste in biohazard bags
must be autoclaved before disposal.
NEEDLE STICKS --
Wash immediately with soap
and lots of water.
Before 4:00 pm go to room NN 256A Campus Health Service
(548-4848).
After 4:00 pm go directly to the
University Hospital Emergency Room
Fill out an Incident report http://www.ehs.washington.edu/forms/IncidentFillin.pdf
Pay attention to what you are doing when you work with needles and you won’t be
stuck!!!!!
1.
ALWAYS know the potential hazards
of a chemical BEFORE you work with
it. You can get this information from the MSDS (Material Safety Data
Sheets). These are filed in
alphabetical order in the MSDS book located above the bench by Peter’s office.
You can obtain on-line MSDS information through the LSS system (see next page) or by calling 3-0467.
2.
Check the Yellow Pages of the University Chemical Safety Manual on the shelf by Peter’s
office for procedures concerning commonly used chemicals
3.
Use
the fume hood when working with toxic or carcinogenic chemicals.
4.
Wear
gloves, goggles, and a lab coat when working with chemicals.
5.
Do
not wear open toed shoes in the lab.
6.
Mouth
pipetting is never allowed.
7.
Emergency eyewashbottles at every sink or use big hose on the sink.
8.
Emergency shower– entry way K-081.
9.
Spills – We have solutions to
neutralize chemical spill on the chemical bench. One is for acids, one is for bases and one is for organic
substances and toxins.
10.
The
“Chemical Safety Manual” is located on the shelf located above the bench by
Peter’s office. Familiarize yourself
with it’s contents.
11. Chemical inventory. Room and location in the front of the MSDS
book list all of our chemicals and in the red binder on freezer 4. They are
also listed on-line in the LSS.
12.
LOG IN ALL INCOMING
CHEMICALS ON THE INVENTORY SHEET ON THE
REFRIGERATOR.
Orders--
order the smallest reasonable amount of carcinogens or toxins. When possible,
order the hazardous substance premixed so you do not have to weigh the powder.
Waste -- Hazardous waste disposal
forms are in the front of the MSDS book.
USE THEM.
Sink logs -- Federal and Washington State laws require a record of chemicals
poured down the drain. Use the sink
logs by the sinks to record your waste.
In an emergency
Call Campus Heath Service 548-4848 Room NN256A
or
go directly to the University Hospital
Emergency Room
or
call 9-911
Copied from: http://www.ehs.washington.edu/Services/Spill_Response.htm
Hazardous material spills that do not endanger workers in the immediate area
may be cleaned up by area personnel who have been trained and are properly
equipped to clean up the spilled material safely. Spill kits are
available from University Stores during business hours.
Our spill
kit is under the sink by the fumehood HSB K-081
The neutralizing absorbents are on the chemical bench in K-081
Hazardous material spills that cannot be safely adsorbed, neutralized, or otherwise controlled at the time of release by employees in the immediate release area are considered to be emergencies requiring outside assistance by the Seattle Fire Department (SFD), Environmental Health & Safety (EH&S), and possibly a spill cleanup contractor.
When in doubt about whether you need help or not, it is best to call for help. EH&S staff cannot clean up spills but can offer advice on how to handle spills. Call 206.543.0467.
When you need emergency help, do the
following:
The UW Police will notify the Seattle Fire Department (SFD) who will respond, stabilize, and contain the spill. Environmental Health & Safety (206.543.0467) will advise SFD as needed. The incident may require use of a spill clean up contractor at the department's expense. All waste must be contained and labeled as instructed by EH&S.
A major chemical spill is:
Pull the fire alarm if someone has been injured. This is the fastest way to get help and alert others nearby of the emergency. The Seattle Fire Department is the primary responder for major chemical spills.
Laboratory employees are responsible for minor spills of the chemicals they commonly use. Cleanup of minor spills is part of managing your laboratory chemicals properly. EH&S can provide training and consultation but does not maintain a Hazardous Materials Response team.
|
If you can answer YES to the following 4 questions, it
is safe for you to clean up the spill: |
|
1. Do you know what chemical was spilled? 2. Do you know the hazards of the spilled chemical? 3. Do you have a chemical spill kit?
|
|
If you answered NO to any of the above questions or need
assistance with the spill cleanup, evacuate the area and call EH&S at
206.543.0467 for assistance. EH&S will help you find the answers to these
questions or bring in an outside Hazardous Materials Contractor to do the
cleanup for you. |
Copied from: http://www.ehs.washington.edu/waste/wastechemical.htm
We have a routine collection set up for
70% ethanol-30% water: Routine 2000
We have a routine collection set up for
Xylene 99% ethanol 1% Routine 2022
Wastes that are generated on a regular basis may be
set up as a routine collection. To qualify for a routine request pickup, the
composition of the waste generated must be identical each time. This is an
extremely efficient process for collection. Your routine waste is assigned a
number that is kept in our database; when you call in or e-mail the routine
number to be picked up, we automatically know the waste's composition,
regulatory codes, disposal options, and where you are located.
In general, chemicals that are caustic, corrosive,
flammable, toxic, or explosive are considered hazardous. Be aware that not
everything that is non-hazardous is non-regulated. Refer to the Chemical Waste
Management Guide or call 685-2848 if uncertain.
|
Zone 3 |
HSB |
685-2849 |
|
Zone 4 |
South Campus, HMC |
616-3200 |
Unknowns present a serious problem for the University.
Without an accurate chemical name, chemicals can neither be handled nor
disposed of in a safe manner.
Unknowns should be processed for collection and disposal as soon as possible
following discovery. Do not store these wastes in satellite areas. Any information,
such as history and physical properties that can be provided to the hazardous
waste staff will aid in the investigation and identification of unknowns.
Disposal companies will not accept unknown chemical waste without an analysis.
To have an unknown scheduled for testing first complete a Chemical Collection
Request Form and mail it to Box 354400 or FAX it to 685-2915. Please
include a budget name and number on the form. Currently, the cost of analysis
is approximately $83 for unknowns of less than 4L (1 gallon).
The problems presented by unknowns can be reduced by periodic examination and
inventory of stock chemicals, promptly labeling new containers, and disposing
of all unused and waste chemicals from a satellite area prior to a faculty or
staff member's departure.
1. To get into the system click
on "Uwick” in the program files, then “SSH secure”.
2. Type curie.u.washington.edu
for host name OR click on curie.u.washington.edu if it is an option.
3. Username= gollahon
Password= rablab1
5. When the tutorial screen
appears, bypass by pressing return
6. At the next menu, chose
Chemical Inventory Menu by choosing or typing “INV”
7. At the next menu, chose
view, update, or insert
V=
view
U=
update (for changing,
deleting, and looking at files)
I= insert (for
inserting new chemicals)
9. Next
screen will be blank version of screen that you will always be working
with. To get to the files you want to
look at or update, must enter building and room codes.
Bldg
ID: HSK -- press return
Room
ID: K 081 – press Shift return
10. The screen should fill with
product information at this point if you are in the update mode.
11. While in update screen:
(.)=
delete
(O)=
save
(1)=
see options
(4)=
add a comment onto a product line
(7)=
see the online MSDS
F3=
gets you out of any screen to the previous screen
F2=
help
for
other commands, see the official LSS manual
TO ADD A CHEMICAL TO AN EXISTING FILE:
1. Log on, go to the INV menu
and chose “I” = insert
2. Enter Bldg ID: HSK-- press return
Room ID: K 081-- press enter
3. Tab to the product name
field
4. Type name of chemical and
press enter on numeric keypad
5. Find the chemical from the
list the will appear by using the down arrow key
6. Press enter to select the
product and have it placed in the inventory
7. At the point, return acts
like TAB to move between columns so that you can add info like “amount”,
“unit,” “surplus,” etc.
8. In “unit” column, press
enter to see available codes, use down arrow to select correct unit (e.g. ML)
and press enter
*If Chemical is not in LSS, but you want to add
it: at step #4 above:
1. Move cursor to blank row
using down arrow
2. Type name of product, press return
3. Type “y” to confirm that you
want to add, and press return
All laboratory members who use radioactive materials
must take the Radiation Safety Course offered by Environmental Health and
Safety
http://www.ehs.washington.edu/training/radclass.htm
http://www.ehs.washington.edu/forms/RSClass_reg_form.htm
Our laboratory is authorized to use 3H
and 32P. 3H has
low energy (0.006 MeV) beta emissions and requires no shielding. The waste is regulated and must be disposed
of in LSA boxes. 32P has beta emission (0.7 MeV) and should be
shielded with plastic.
The waste for 32P is in SEPARATE boxes
from the 3H.
All 32P
waste is in K-081 (main lab).
All 3H
waste is in K-089 (tissue culture room).
Make sure you know where to put the waste for your
isotope.
All liquid 32P sewer waste MUST be
recorded on the clipboard that is on the shelf above the PCR machines. At the
present time, there is 3H in K-089 and 32P in K-081.
The Radiation Safety Manual is on the
shelf above the bench by Peter’s office.
NO
FOOD OR DRINK IS ALLOWED IN ROOM K-089 or K-081. BOTH ROOMS MUST BE LOCKED WHEN
NO ONE IS PRESENT. We can lose our license over these two things!!!
Performing Calibrations
http://www.ehs.washington.edu/RadSaf/Rad_Calibrations.htm
The
UW Radiation Safety Office (RSO) operates an instrument calibration facility
(call (206)543-6328 for more information). Costs of meter calibration at the UW
facility are comparable to other calibration facilities.
It is not required that the RSO calibrate your instruments. Calibrations may be performed by any qualified agency or by the instrument owner, provided that it can be demonstrated that the calibration is performed correctly.
To insure compliance with state regulations:
Fire Safety. You must leave the area when there is a fire alarm. Make sure your lab area is as safe as possible before leaving. Do not use elevators.
The fire extinguishers are located outside the lab door (room K-081) and in K-079 (flow cytometry room). You should know how to use them. There is a class for this if you would like to take it. http://www.ehs.washington.edu/forms/classes/fetform.htm
In case of a big fire, activate the fire alarm in the hall. Then leave the building.
Class offered through EEHS http://www.ehs.washington.edu/forms/classes/edform.htm
When
the Earth Shakes
After the Earthquake
At the University you should have a predetermined place for you and your
co-workers to meet -- kiosk outside K-wing.
·
Report to the kiosk outside K-wing, and take note of who is
missing and any injuries that may exist.
Hazard
Hunt
Conduct a hazard hunt at work.. Most injuries occur from interior flying or
falling items. Check at least the following items:
Top heavy free standing furniture, Heavy or breakable objects
Electronic equipment and appliances.
Unsecured cupboard doors
Hazardous chemicals, Utilities (gas, water, electrical)
The UW Campus Health Service (CHS) is the program for occupational health needs of all UW employees, students, faculty, volunteers and other designated UW affiliates.
The CHS clinic is located at the UW Medical Center on the 2nd floor (NN256A) next door to the Emergency Medicine Service or at Hall Health Primary Care Center.
Call (206) 548-4848
http://depts.washington.edu/hhpccweb/CampusHealth.html
http://www.ehs.washington.edu/Services/accinc.htm
In case of a needle stick.
1. Report the incident to Katy, Martin, or Peter.
2. Seek medical care in the CHS clinic or Emergency Room without delay.
3.
Laboratory
tests and medication for HIV post-exposure prophylaxis should be started
within 1 to 2 hours after exposure.
4. Fill out an incident report form http://www.ehs.washington.edu/forms/IncidentFillin.pdf
Call Robert Davis at 5-9438
M-F call 3-3010 or put your request on line at http://www.washington.edu/admin/facserv/workrequest.html. You will need a budget number for any repair
that is not heating or cooling. The air-conditioner in the flow room requires a
budget # because it is not a standard part of the building.
Evenings
and weekends call the University Police at 3-3010 wait for the end of the
message and then dial 0. They will contact the physical plant manager who is
on-call.
Call Steris at 1-800-333-8828. You will need to give them the institution,
the room number and the serial number of the autoclave. Account # 46860
Gravity Sterilizer Room K059 serial # 011589306
Vacumatic Sterilizer
Room K059 serial #
011589305
Gravity Sterilizer (dirty autoclave)
Room K092 serial #
012788315
Pipetmen
go to G-156 HSB along with a budget #
Small equipment can be taken to T-287
along with a budget #
Large equipment (eg. incubators) call
543-5580 again you will need a budget #
Kurt Geissel
Email: kutis@u.washington.edu
Phone: direct (206) 685-9343 (with Voice Mail) department (206) 543-9510
Fax: (206) 616-3360
Call 3-0133
Call Michelle at 206-521-1740 (for pick up call 3-6729)
Pick ups are on Fridays only
All experiments must be recorded in a laboratory notebook. Katy can supply you with a notebook.
1. Use a numbered bound notebook for all entries. Number the pages and use the first few pages for an index.
2. Use pen for all entries
3. Date all entries. Write the day and full date at the top of the page. Try to keep different experiments on different pages.
4. Record ALL experiments – Successes, failures, and things you don’t understand.
5. Enter primary data immediately. Do not keep notes on scraps of paper or paper towels to enter later. Record details -- amount, concentration, how solutions were made, time and temperature of incubations, centrifuge speed, mistakes you made along the way, etc. Make sketches or diagrams if necessary.
6. Explicitly list, label, and identify your controls or standards.
7. If you run your experiment on the flow cytometer, make a note of the protocol used and the file names. It is a good idea to make a copy of the list you give to Thong with sample numbers for your notebook.
8. End each record with your conclusion and plans. Do this as soon as possible. You should have some hypothesis of what you expected from the experiment. Did this experiment confirm your hypothesis or not?
N2 TANK LOG INSTRUCTIONS:
The frozen cell line catalog is in the TC lab K-089 (brown binder). In an effort to minimize database disasters, you should use this catalog and not the computer to look up, record, edit or remove entries. Judy and only Judy will edit the computer logs and update this catalog as needed.
THE FIRST SECTION IS AN ALPHABETICAL LISTING BY CELL NAME.
THE SECOND SECTION IS A RACK AND BOX LISTING.
INSTRUCTIONS FOR REMOVING OR EDITING:
1. Look up your cell line in the ALPHABETICAL LISTING.
2. If you remove a line, highlight it with the attached yellow pen.
3. If you edit a line, just write the appropriate change in pen next to the entry.
INSTRUCTIONS FOR ADDING:
1. Look up the appropriate slot in the RACK AND BOX LISTING.
2. Record your new entry in pen on the appropriate line.
3. Highlight the new entry with the attached yellow pen.
Paraffin
BLOCK LOG INSTRUCTIONS:
The paraffin block catalog is in the K-081 (brown binder) under the bench in the middle bay. In an effort to minimize database disasters, you should use this catalog and not the computer to look up, record, edit or remove entries. Jeanne and only Jeanne will edit the computer logs and update this catalog as needed.
THE LISTINGS ARE BY DRAWER AND ROW
INSTRUCTIONS FOR REMOVING A BLOCK:
1. Look up your block.
2. Make a slip of paper and label it with the name of the block you will be taking.
3. Highlight the block name with the attached yellow pen. Write your initials and date by the block name
4. Remove the block and place the slip of paper in the slot so we will know where the block belongs when you return it.
INSTRUCTIONS FOR ADDING:
5. Identify the slot and drawer where the block lives. There should be a piece of paper in the slot.
6. Remove the paper and replace the block
7. In the log write returned and the date.
The computers in the
Rabinovitch Lab are maintained by the Department of Pathology. For computer support or questions go to the
following web site. http://www.pathology.washington.edu/tech/ or call (206) 221-5790
Access. In order to have access to a computer in the lab you must be assigned
a password. Peter or Mike will send a
request to info@pathology.washington.edu along with the individual’s name and email address.
Computer
glitches. Send a Tech request to Computer Support http://www.pathology.washington.edu/tech/
Computer Use. The computers in the lab are
research tools and as such they are to be used to write papers and reports,
process data, access journal articles, correspond with colleagues concerning
research information etc. They are NOT
for playing games or excessive correspondence with friends.
For questions concerning UW
policy see the following web site:
http://www.washington.edu/computing/rules/
|
Improper use
of UW computers and networks can get you into trouble. It is your
responsibility to know the rules. These UW guidelines and examples of the
rules and laws of the state of Washington will help you to use computing and
networking resources appropriately. Revised Code
of Washington (RCW) - Laws passed by the State Legislature RCW 9a.52.110 Computer trespass in the first degree. RCW 42.52.180 Use of public resources for political campaigns. RCW 42.17.260 Documents and indexes to be made public. RCW 42.52.160 Use of persons, money, or property for private gain. Washington
Administrative Code (WAC) - Rules and regulations for all state agencies
WAC 292-110-010 Appropriate and inappropriate use of state resources. (revised
04/98) Frequently
asked questions about email and Internet use Washington
State Attorney General's Office Junk Email - Information from the Consumer Protection Division Email and Computer Usage by Faculty
and Staff - Notice from the Provost and Executive Vice
President When you establish a UW NetID you open a gateway to a wealth of computing resources at the UW and beyond. Remember that inappropriate use of these computing resources can result in loss of access to them. Staff use of Uniform Access computers is subject to the approval of their departments and supervisors. |
UW-GS 5
(Revised) January 1998
http://www.washington.edu/admin/recmgt/uw.gs5.html
Electronic mail is a technology that allows for the written exchange of information in machine readable format. Email represents not the system, but the information communicated through the system. Email messages are public records when they are created or received in the transaction of public business. They must be retained as evidence of official policies, actions, decisions or transactions. Email messages are considered public record material with legally mandated retention requirements, and are subject to the same rules and regulations as those which govern the management of paper records. Email is managed by its content, not its format.
Purpose. Email is meant for informal correspondence and scholarly
communications. It should not be used for official record-keeping purposes.
(For further guidelines on the uses of email, see Knowing
the Rules on the Computing and Networking page)
Electronic
Management. The University of Washington does not have central
processes or resources to manage email in a way that meets specific Washington
State Code regulating the management of public records. Backup of folders may
not exist or folders may only be kept for a very short duration, so inadvertent
deletion of messages can result in loss of information.
Privacy. Confidential and sensitive information should not be sent
via email. The privacy and integrity of an email message cannot be guaranteed.
Also, once created, there is no guarantee that attempts to erase or delete
email will be effective.
Release. Under the Public Records Act (RCW 42.17.250 et seq.), if
requested by a member of the public, email must be transmitted to the UW Public
Records Office for review and possible release. Tape or disk copies of deleted
documents are also subject to the Public Records Act.
Litigation. Unless protected by legal privilege, email can and will be
discoverable in litigation. This applies to email on disk or on a backup
medium.
Legal
Proceedings. Like other forms of records, and regardless of retention
requirements, email pertaining to pending audits, or judicial or public
disclosure proceedings must not be destroyed until the issue is resolved.
Email messages are subject to the guidelines in RCW 40.14 regulating the
preservation and destruction of public records and as such are managed through
records retention schedules.
Email that is
considered to have no administrative, legal, fiscal, or archival requirements
for its retention may be deleted as soon as it has served its reference
purpose. Refer to UW-GS4 .
The following
categories of messages have specific retention periods. Refer to the University
General Records Retention Schedule or your Departmental Records Retention
Schedule for the retention period of individual items.
These records must be printed out and saved as a paper document as it is difficult for a department or unit to retain electronic records since individuals, electronic media, and desktop hardware and software change. Backup procedures for desktop equipment are often neglected and disaster recovery routines are not practiced. The only way to assure the retention of information is to print it and file it by subject or function in the appropriate paper filing system.
Policy and Procedure Directives
Correspondence or memoranda related to official public
business
Agendas and minutes of meetings
Documents related to legal or audit issues
Messages which document departmental/office actions,
decisions, operations and responsibilities
Documents that initiate, authorize or complete a business
transaction
Drafts of documents that are circulated for comment or
approval
Final reports or recommendations
Appointment Calendars
Email distribution lists
Other messages sent or received that relate to the
transaction of University business.
1. Any one who works with animals is required to attend the animal training session given by the Department of Comparative Medicine every year. See policy page: http://cer.hs.washington.edu/iacuc/policies/index.html
2. The booklet written by the Department of Comparative Medicine in on the lab safety shelf above the bench by Peter's office (Laboratory Animal Regulations).
3. You must have an approved animal protocol for any procedure you perform on animals. It is a good idea to list the number of the protocol used in your laboratory notebook when you do the procedure. Our approved protocols are in the back of the Laboratory Animal Regulations book. Protocol forms are available on-line http://cer.hs.washington.edu/iacuc/iacucforms/index.html
4. If you need help with a procedure see Katy; she has worked with animals for many years and is familiar with most animal handling techniques.
5. If you have questions about a protocol or procedure and Katy does not know the answer, veterinarians are on call 24 hr. a day to help. Call 543-6257 for assistance.
Bottle
sterile water for irrigation
Autoclaved
flasks
Bell
filter
MCDB
153 from Sigma (in refrigerator crisper)
Sodium
Bicarbonate (7.5% solution) Invitrogen/Gibco
· Pour about half
of the distilled H20 into large beaker.
· Add MCDB 153
powder to the beaker.
· Rinse the MCDB
153 packet with bottle sterile distilled H20 and add it to
the beaker.
· Fill the beaker
up to about 900 ml mark
· Stir the
solution
· Add 15.7 ml of
NaHCO3
· While stirring,
bring the final pH to 7.2 by adding appropriate 4N HCl or
4N NaOH.
· Using 1 liter cylinder, add enough distilled
H20 to bring it to 1 liter
solution
· Filter with bell filter into 200 ml plastic
flasks.
Bottle
sterile water for irrigation
Two
autoclaved 500 ml bottles
Bell
filter
L-15
from Sigma (in refrigerator crisper)
· Pour 1 liter of
the distilled H20 into graduated cylinder.
· Pour about half
of distilled H20 the large beaker.
· Add L-15 powder
to the beaker.
· Rinse the L-15
packet with some distilled H20 and add it to the beaker.
· Fill the beaker
with the rest of the water from the cylinder.
· Stir the
solution
· While stirring,
bring the final pH to 7.2 by adding appropriate 4N HCl or
4N NaOH.
· Filter with bell filter into 500 ml bottles.
|
Reagent |
Final
Conc. |
1 liter |
200 ml |
Stock |
|
MCDB-153 |
1 X |
1 package |
|
|
|
Hydrocortisone |
0.4 mg/ml |
80 ml |
16 ml |
50 mg/ml |
|
EGF |
20 ng/ml |
2 ml |
10 mg/ml |
|
|
Cholera Toxin |
10-10 M |
84 ml |
16.8 ml |
100 mg/ml |
|
Adenine |
20 mg/L |
200 ml |
40 ml |
100 mg/ml |
|
Bovine Pituitary Extract |
140 mg/ml |
140 mg |
25 mg |
[see below] |
|
Fetal Bovine Serum |
5% |
50 ml |
10 ml |
|
|
Penicillin-Streptomycin |
100 unit/ml |
10 ml |
2 ml |
10,000 units/ml |
|
Amphotericin B |
0.25 mg/ml |
1 ml |
200ml |
250 mg/ml |
|
Insulin-transferrin- selenium |
5mg/ml |
1ml |
200ml |
10 mg/ml |
|
L-glutamine |
4 mM |
20 ml |
4 ml |
|
Media
storage: Store in refrigerator
--------------------------------------------------------------------------------------------
Preparation of Growth Factors
1.
Hydrocortisone (5 mg/ml stock) Sigma
H-0396
Dissolve in water and aliquot one ml vials
and freeze
2.
Epidermal growth factor R&D Systems
Cat.# 236-EG
3.
Adenine (100 mg/ml) Sigma A-2786
1
gram of adenine + 10 ml 1N NaOH
Aliquot
in 1 ml
Store
in freezer
4.
Cholera toxin (100 mg/ml) Sigma C-8052
0.5
mg Cholera toxin + 5 ml dH20
Aliquot
into microcentrifuge tubes
Store
in the refrigerator
5.
Bovine Pituitary Extract
**Preparation depends on source of
BPE**
**Test new BPE before old lot # runs
out**
Invitrogen/Gibco BRL catalog #
13028-014 (25 mg in 5 mls--store frozen)
-Thaw and place into centrifuge tube. Spin down 5 minutes
Add supernat to media
- Remove 5 ml of media and resuspend
BPE pellet. Spin down
another 5 minutes. Add
supernat to media.
- Discard pellet
6.
Fungizone (Invitrogen/Gibco)
Thaw and aliquot into 1.7ml. microfuge
tubes. Refreeze at -20.
7. L-glutamine
Aliquot in 8 ml volumes.
Store in freezer. Thaw until clear, then
add to media.
8.
Insulin-transferrin-selenium/ITS (10
mg/ml, Invitrogen/Gibco)
Biohazardous material.
50 mg ITS + 5 ml sterile dH20
Aliquot 200